Unix Technical Forum

SEO

vBulletin Search Engine Optimization


Go Back   Unix Technical Forum > Database Server Software > MySQL

Register FAQ Members List Calendar Search Today's Posts Mark Forums Read
  #1 (permalink)  
Old 02-28-2008, 07:37 AM
Ted
 
Posts: n/a
Default Trouble with truncation error when loading data from a file

The table has many columns, but it includes a column like:

CREATE TABLE f (
...
`x` DECIMAL(10,2) DEFAULT NULL,
...
) ENGINE=InnoDB;

I use a statement like the following to load the data from a file.

LOAD DATA INFILE "path to file" INTO TABLE f (list of columns);

When I try to run this, I get an error 1265 "Data truncated for column
"x" at row 3.

There are thousands of rows in this file.

The fields in the rows are tab delimited. Two consecutive tabs means
there is no data for that specific field in that specific row. The
first two rows do not have any missing fields.

I do not understand this. MySQL kows that data for field "x" may be
missing, from the definition provided in creating the table, and that
when this happens, the value ought to be set to null. So why is it
crashing and burning on the first null value it encounters?

How can I fix this so that I can reliably load data into my tables from
these files, and be confident it properly handles missing values?

Ted

Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #2 (permalink)  
Old 02-28-2008, 07:37 AM
Bill Karwin
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

Ted wrote:
> LOAD DATA INFILE "path to file" INTO TABLE f (list of columns);
>
> When I try to run this, I get an error 1265 "Data truncated for column
> "x" at row 3.
>
> How can I fix this so that I can reliably load data into my tables from
> these files, and be confident it properly handles missing values?


If you got data truncation while inserting to a DECIMAL column, I'd
guess that the value contains illegal characters of some kind, that are
not part of a numeric value. You should clean up your import file so
that it contains legal values.

One could apply some script (e.g. Perl) to the import file prior to
loading it into the MySQL table. The script cleans up values to make
sure they're legal for the format you're loading it into. Then it can
either output a new data file for use with LOAD DATA, or else the script
can use a database library to insert directly into the database (but
LOAD DATA is undoubtedly faster for bulk loads).

Another solution is to LOAD DATA to a temporary table that has only
VARCHAR columns instead of DECIMAL, and then do some cleanup in SQL
expressions, as you copy data from the temp table to your real table.

In my experience, real-world data drops contains values that are not
formatted consistently enough to be loaded directly into columns with
strict format requirements, such as INTEGER, NUMERIC, DATE, ENUM, etc.,
and there needs to be a "staging" load to provide an opportunity to
clean up the data.

Regards,
Bill K.
Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #3 (permalink)  
Old 02-28-2008, 07:37 AM
Ted
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

If the file contains illegal characters, they are not visible when the
file is opened in Notepad, and they appear to take up no space when
using the right arrow key to move through a record one character at a
time, but who knwos?

I tried the option of creating a temporary file with the same column
names, but all columns being defined as having type varchar(256) or
varchar(45), depending on the field (I used the MEMORY engine and it
didn't like the text type I occassionally use. But in this, too, I
encountered trouble.

The second column in the first table is a date with the format
mm/dd/yyyy. We discussed this particular problem before. What I don't
understand is that when loading this data into a table where everything
is defined to be a varchar field, why would it care what the date
format is. Should it not just treat that date field as any other
string?

As it is, no data gets loaded into the temporary tables.

Do you have any simple examples of the perl scripts or "cleanup in SQL
expressions" you mention?

Thanks,

Ted

Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #4 (permalink)  
Old 02-28-2008, 07:37 AM
Bill Karwin
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

Ted wrote:
> The second column in the first table is a date with the format
> mm/dd/yyyy. We discussed this particular problem before. What I don't
> understand is that when loading this data into a table where everything
> is defined to be a varchar field, why would it care what the date
> format is. Should it not just treat that date field as any other
> string?


That is indeed odd. What error does it give?
Can you insert one record to the table manually with an INSERT
statement, using the values from one of the rows of the input file?

Does this still get an error if you use a non-MEMORY table? A
non-TEMPORARY table?

> As it is, no data gets loaded into the temporary tables.
>
> Do you have any simple examples of the perl scripts or "cleanup in SQL
> expressions" you mention?


Something like the following (off the cuff, not tested).
Supply the database name, user, and password where you see "...".

#!perl -an

use DBI;

BEGIN {
my $dsn = $dsn = "DBI:mysql:database=...";
my $user = '...';
my $password = '...';
$dbh = DBI->connect($dsn, $user, $password);
if (!defined($dbh)) {
die("Error:" . $DBI::errstr . "\n");
}
$sth = $dbh->prepare("INSERT INTO mytable (a, b, c) VALUES (?, ?, ?)");
if (!defined($sth)) {
die("Error:" . $dbh->errstr . "\n");
}
}

# Now the code executes for each line of input, thanks to "-n".
# @F is an array of the fields, auto-split by "-a".

# modify elements of the array, for instance
# reverse the characters of element 1:

$F[1] = reverse($F[1]);

# Execute our prepared INSERT statement, with the modified values:

$sth->execute(@F)
or die("Error:" . $dbh->errstr . "\n");

Regards,
Bill K.
Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #5 (permalink)  
Old 02-28-2008, 07:37 AM
Gordon Burditt
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

>> When I try to run this, I get an error 1265 "Data truncated for column
>> "x" at row 3.
>>
>> How can I fix this so that I can reliably load data into my tables from
>> these files, and be confident it properly handles missing values?

>
>If you got data truncation while inserting to a DECIMAL column, I'd
>guess that the value contains illegal characters of some kind, that are
>not part of a numeric value. You should clean up your import file so
>that it contains legal values.


It's easy to get data truncation inserting to a DECIMAL column.
All it has to do is round the value. No illegal characters
need be involved. For example:

mysql> create table t1 ( a1 decimal(12,2) );
mysql> insert into t1 values (4/3);
mysql> show warnings;
(OK, so I'm not drawing the cute boxes here)
Note 1265 Data truncated for column 'a1' at row 1
mysql> insert into t1 values (1.3456);
mysql> show warnings;
Note 1265 Data truncated for column 'a1' at row 1
mysql>

Gordon L. Burditt
Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #6 (permalink)  
Old 02-28-2008, 07:37 AM
Ted
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

Well, so far I have been able to verify that the data is clean: no
bogus characters.

I loaded the file into Open Office'sspreadsheet. It properly detected
that the data file is a tab delimited, plain text file, and loaded and
displayed the data without incident.

The error I get with the temporary files having only varchar fields is
that 11/22/1999 is an invalid value for a date. I don't understand
this since the table has only varchar fields.

I CAN insert data, a record at a time using the query browser!

I'll work on the other questions you asked over the weekend.

Ted

Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #7 (permalink)  
Old 02-28-2008, 07:37 AM
Ted
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

In my case, the issue seems to be related to the fact the field is
empty. All of the fields in all of the records prior to the problem
record, and all of the fields on the problem record prior to the
problem field, have proper data values. The field causing the problem,
on the record causing the problem, is empty (represented in the data
file by consecutive tabs).

Are there known issues in MySQL WRT how LOAD DATA INFILE handles
missing values?

Ted

Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #8 (permalink)  
Old 02-28-2008, 07:37 AM
Ted
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

The problem occurs regardless of the DB engine I use or whether or not
the table is temporary.

The error message is "Incorrect DATETIME value 11/22/1999 at line 1"
and the error code is 1292. Remember, this is when trying to load the
data into a temporary table with ALL of the fields defined as VARCHAR
of varying lengths.

Since I can load the file into a spreadsheet with Open Office, I know I
can create a Java program to load the data into memory, and then use
the java program to load the data into MySQL from the java program, but
I have been resisting that options since it is bound to be as slow as
molasses in January. The largest table has 26 fields and several
thousand records. I am now expecting to have to sanitize the data
anyway since, on loading the data into a spreadsheet, I have learned
that there are some problems including the fact that the date fields
are inconsistently formatted (especially in regard to the number of
characters used to represent the year).

Ted

Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #9 (permalink)  
Old 02-28-2008, 07:37 AM
jfgroff@gmail.com
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

Hi Ted,

Let me share my experience with you: I have stumbled on the exact same
problem, with sometimes millions of warnings when loading geographical
data into a table with decimal fields. In the end, it is no big deal:
either the input data has more decimal digits than your destination
field and it gets properly truncated, or it's empty and gets converted
to 0. Depending on your application requirements, you might want to
change the 0 values to NULL after loading the initial data.

Warning 1265 is really just a note to get your attention at the loss of
precision; after you analyze the situation and understand what is
happening, you can safely ignore it.

Hope this helps,

JFG

Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #10 (permalink)  
Old 02-28-2008, 07:38 AM
Ted
 
Posts: n/a
Default Re: Trouble with truncation error when loading data from a file

But how do you ignore it when the warning or error stops the process of
loading the data entirely. This database has 28 fields and several
thousand records. The third record has an empty value for one field,
and that is the field that gives the message about data being
truncated. After I read the error message, I look in the table and I
find only the first two records!

As I said before, I loaded the data into my spreadsheet application and
examined the data. There are no illegal chacacters that I can find,
but the field and record containing it are the first in the database.

Ted

Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
Reply


Thread Tools
Display Modes

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

vB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are On
Pingbacks are On
Refbacks are On
Forum Jump


All times are GMT. The time now is 07:05 PM.


Powered by vBulletin® Version 3.6.5
Copyright ©2000 - 2008, Jelsoft Enterprises Ltd.
SEO by vBSEO 3.2.0
UnixAdminTalk.com

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630