Unix Technical Forum

SEO

vBulletin Search Engine Optimization


Go Back   Unix Technical Forum > Unix Operating Systems > HP-UX Operating System

Register FAQ Members List Calendar Search Today's Posts Mark Forums Read
  #1 (permalink)  
Old 01-16-2008, 05:56 PM
Nurman Haripin
 
Posts: n/a
Default Pthread Problem

We have a multi-threading application using third party tool "CPLEX"
which had been running for quite number of years without any problem.
Lately, we have encountered with jobs hanging. We noticed this problem
after upgrading from HP-UX 11.0 to 11.11. There was no code change
when upgrading to HP-UX 11.11 (only compilation in the new
environment).
The following is from the stack dump. As you can see thread 1 is
waiting for thread 2 to finish before joining. However, thread 2
never finishes. This problem does not always happen from run to run,
but on the average happens in 1 out of 10 runs. It occurs more often
when the machine is heavily used with multiple jobs running at the
same time and each job uses 2 or more threads.
Any idea what's happening?

uname -a:
HP-UX carlsbad B.11.11 U 9000/800 unknown unknown HP-UX

thread 2 where
#0 0x40000000003618a4 in autoorder_par ()
#1 0x40000000001a76a4 in posforkstub ()
#2 0xc00000000006c250 in __pthread_body () from
/usr/lib/pa20_64/libpthread.1
#3 0xc000000000076b0c in __pthread_start () from
/usr/lib/pa20_64/libpthread.1

thread 1 where
#0 0xc000000000076dbc in ___lwp_wait_sys () from
/usr/lib/pa20_64/libpthread.1
warning: reading `r3' register: No data
#1 0xc000000000076870 in _lwp_wait () from
/usr/lib/pa20_64/libpthread.1
warning: reading `r3' register: No data
#2 0xc00000000006d778 in __vp_join () from
/usr/lib/pa20_64/libpthread.1
warning: reading `r3' register: No data
#3 0xc00000000006c368 in pthread_join () from
/usr/lib/pa20_64/libpthread.1
#4 0x40000000001a761c in CPXPparfork ()
#5 0x40000000003612c8 in BAR_neword ()
#6 0x4000000000360054 in CPXPbar_doorder ()
#7 0x4000000000353c34 in CPXPbar_main ()
#8 0x400000000026714c in CPXPcpxbar ()
#9 0x4000000000266d68 in baropt ()
#10 0x40000000002651e0 in CPXPShybbaropt ()
#11 0x400000000018408c in CPXhybbaropt ()
#12 0x40000000001ea6d4 in bsolvelp ()
#13 0x40000000001e9ff8 in CPXPsolvelp ()
#14 0x40000000001aa490 in mipsetup ()
#15 0x40000000001a8b94 in mipopt ()
#16 0x40000000001a8368 in CPXPSmipopt ()
#17 0x40000000001841bc in CPXmipopt ()
#18 0x40000000000c7608 in CPXOptimizer::Optimize
(this=0x80000001000395a0, optimizati
#19 0x4000000000087390 in FAMOptimizerBase::SolveMIP
(this=0x80000001000395a0, varGro
#20 0x400000000008bffc in FAMOptimizerBase::BranchAndBound
(this=0x80000001000395a0,
#21 0x400000000008b218 in FAMOptimizerBase::BranchAndBound
(this=0x80000001000395a0)
#22 0x40000000000a9970 in SolveProblem
(optimizerObj=0x80000001000395a0, isLegFamForS
AFfamDir=0x800003ffe80f1b38 "/export/local_fs/riad",
scenario=0x800003ffe80f1a30
#23 0x40000000000a7c14 in main (argc=3, argv=0x800003ffe80f1380) at
FAM_OptDriver.C:1



Nurman
Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #2 (permalink)  
Old 01-16-2008, 05:56 PM
Ulrich.Teichert@gmx.de
 
Posts: n/a
Default Re: Pthread Problem

In <943aa8d.0404121154.68818bb5@posting.google.com> nurman.haripin@aa.com (Nurman Haripin) writes:

[trimmed the newsgroup list - I suspect it's an operating system
problem, not a general one]

>We have a multi-threading application using third party tool "CPLEX"
>which had been running for quite number of years without any problem.
>Lately, we have encountered with jobs hanging. We noticed this problem
>after upgrading from HP-UX 11.0 to 11.11. There was no code change
>when upgrading to HP-UX 11.11 (only compilation in the new
>environment).


Have you applied the lastest and greatest patches for 11.11? Particularly
if there are some for the libc & libpthread. Do you use thread local
storage? How big did you set the thread stack size? I vaguely remember
that the default stack size for threads changed from 11.0 to 11.something.
At least, we got nice stack smashers back then.....

>The following is from the stack dump. As you can see thread 1 is
>waiting for thread 2 to finish before joining. However, thread 2
>never finishes. This problem does not always happen from run to run,
>but on the average happens in 1 out of 10 runs. It occurs more often
>when the machine is heavily used with multiple jobs running at the
>same time and each job uses 2 or more threads.
>Any idea what's happening?


>uname -a:
>HP-UX carlsbad B.11.11 U 9000/800 unknown unknown HP-UX


>thread 2 where
>#0 0x40000000003618a4 in autoorder_par ()
>#1 0x40000000001a76a4 in posforkstub ()
>#2 0xc00000000006c250 in __pthread_body () from
>/usr/lib/pa20_64/libpthread.1
>#3 0xc000000000076b0c in __pthread_start () from
>/usr/lib/pa20_64/libpthread.1

[del]

To me, this looks like thread 2 has never properly started, if this
is the whole stack trace of it. I would first check if this thread
does something useful in this situation at all. If not, check for
patches or report the problem to HP support (if you have a support
contract, that is),

HTH,
Uli
--
Dipl. Inf. Ulrich Teichert|e-mail: Ulrich.Teichert@gmx.de
Stormweg 24 |listening to: Noticable One (Rotten Apples)
24539 Neumuenster, Germany|Obstacle 1 (Interpol) Paranoia (N.Y. Rel-X)
Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #3 (permalink)  
Old 01-16-2008, 05:56 PM
Paul Pluzhnikov
 
Posts: n/a
Default Re: Pthread Problem

nurman.haripin@aa.com (Nurman Haripin) writes:

> Any idea what's happening?


Looks like your program fork()s after having created at least
one thread.

Fork()ing multithreaded programs is *extremely* tricky business,
best avoided.

Be sure you correctly lock/unlock all your mutexes in pre/post_fork,
and that you execute no async-signal-unsafe functions between fork()
and exec().

> Lately, we have encountered with jobs hanging. We noticed this problem
> after upgrading from HP-UX 11.0 to 11.11. There was no code change


It is quite likely that the race condition leading to the current
deadlock always existed, but internal libc locks under 11.0 prevented
it from ever showing up.

If you can port/run your program under Linux, valgrind (with
hellgrind skin) at http://valgrind.kde.org/tools.html
and HP/Digital's Visual Threads at
http://h21007.www2.hp.com/dspp/tech/...3,5062,00.html
may provide some help.

As I just dicovered, beta release of Visual Threads is also available
on HP-UX 11.22/IA-64


Cheers,
--
In order to understand recursion you must first understand recursion.
Remove /-nsp/ for email.
Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #4 (permalink)  
Old 01-16-2008, 05:56 PM
Nissan 350Z
 
Posts: n/a
Default Re: Pthread Problem


> We have a multi-threading application using third party tool "CPLEX"
> It occurs more often
> when the machine is heavily used with multiple jobs running at the
> Any idea what's happening?


Install this patch:
PHCO_29028 1.0 libsec cumulative patch

Alain.



Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #5 (permalink)  
Old 01-16-2008, 05:56 PM
Kiran K Patel
 
Posts: n/a
Default Re: Pthread Problem

Hi,

Did you do a check on the thread stack size for thread -2 ?
use pthreadsetstack and check.

Nurman Haripin wrote:
> We have a multi-threading application using third party tool "CPLEX"
> which had been running for quite number of years without any problem.
> Lately, we have encountered with jobs hanging. We noticed this problem
> after upgrading from HP-UX 11.0 to 11.11. There was no code change
> when upgrading to HP-UX 11.11 (only compilation in the new
> environment).
> The following is from the stack dump. As you can see thread 1 is
> waiting for thread 2 to finish before joining. However, thread 2
> never finishes. This problem does not always happen from run to run,
> but on the average happens in 1 out of 10 runs. It occurs more often
> when the machine is heavily used with multiple jobs running at the
> same time and each job uses 2 or more threads.
> Any idea what's happening?
>
> uname -a:
> HP-UX carlsbad B.11.11 U 9000/800 unknown unknown HP-UX
>
> thread 2 where
> #0 0x40000000003618a4 in autoorder_par ()
> #1 0x40000000001a76a4 in posforkstub ()
> #2 0xc00000000006c250 in __pthread_body () from
> /usr/lib/pa20_64/libpthread.1
> #3 0xc000000000076b0c in __pthread_start () from
> /usr/lib/pa20_64/libpthread.1
>
> thread 1 where
> #0 0xc000000000076dbc in ___lwp_wait_sys () from
> /usr/lib/pa20_64/libpthread.1
> warning: reading `r3' register: No data
> #1 0xc000000000076870 in _lwp_wait () from
> /usr/lib/pa20_64/libpthread.1
> warning: reading `r3' register: No data
> #2 0xc00000000006d778 in __vp_join () from
> /usr/lib/pa20_64/libpthread.1
> warning: reading `r3' register: No data
> #3 0xc00000000006c368 in pthread_join () from
> /usr/lib/pa20_64/libpthread.1
> #4 0x40000000001a761c in CPXPparfork ()
> #5 0x40000000003612c8 in BAR_neword ()
> #6 0x4000000000360054 in CPXPbar_doorder ()
> #7 0x4000000000353c34 in CPXPbar_main ()
> #8 0x400000000026714c in CPXPcpxbar ()
> #9 0x4000000000266d68 in baropt ()
> #10 0x40000000002651e0 in CPXPShybbaropt ()
> #11 0x400000000018408c in CPXhybbaropt ()
> #12 0x40000000001ea6d4 in bsolvelp ()
> #13 0x40000000001e9ff8 in CPXPsolvelp ()
> #14 0x40000000001aa490 in mipsetup ()
> #15 0x40000000001a8b94 in mipopt ()
> #16 0x40000000001a8368 in CPXPSmipopt ()
> #17 0x40000000001841bc in CPXmipopt ()
> #18 0x40000000000c7608 in CPXOptimizer::Optimize
> (this=0x80000001000395a0, optimizati
> #19 0x4000000000087390 in FAMOptimizerBase::SolveMIP
> (this=0x80000001000395a0, varGro
> #20 0x400000000008bffc in FAMOptimizerBase::BranchAndBound
> (this=0x80000001000395a0,
> #21 0x400000000008b218 in FAMOptimizerBase::BranchAndBound
> (this=0x80000001000395a0)
> #22 0x40000000000a9970 in SolveProblem
> (optimizerObj=0x80000001000395a0, isLegFamForS
> AFfamDir=0x800003ffe80f1b38 "/export/local_fs/riad",
> scenario=0x800003ffe80f1a30
> #23 0x40000000000a7c14 in main (argc=3, argv=0x800003ffe80f1380) at
> FAM_OptDriver.C:1
>
>
>
> Nurman


Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #6 (permalink)  
Old 01-16-2008, 05:56 PM
Nurman Haripin
 
Posts: n/a
Default Re: Pthread Problem

Sorry, but how do you use "pthreadsetstack"? Is it a command in gnu debugger?

Kiran K Patel <KiranKPatel@verizon.net> wrote in message news:<5G0fc.5904$hg1.5198@nwrddc02.gnilink.net>...
> Hi,
>
> Did you do a check on the thread stack size for thread -2 ?
> use pthreadsetstack and check.
>
> Nurman Haripin wrote:
> > We have a multi-threading application using third party tool "CPLEX"
> > which had been running for quite number of years without any problem.
> > Lately, we have encountered with jobs hanging. We noticed this problem
> > after upgrading from HP-UX 11.0 to 11.11. There was no code change
> > when upgrading to HP-UX 11.11 (only compilation in the new
> > environment).
> > The following is from the stack dump. As you can see thread 1 is
> > waiting for thread 2 to finish before joining. However, thread 2
> > never finishes. This problem does not always happen from run to run,
> > but on the average happens in 1 out of 10 runs. It occurs more often
> > when the machine is heavily used with multiple jobs running at the
> > same time and each job uses 2 or more threads.
> > Any idea what's happening?
> >
> > uname -a:
> > HP-UX carlsbad B.11.11 U 9000/800 unknown unknown HP-UX
> >
> > thread 2 where
> > #0 0x40000000003618a4 in autoorder_par ()
> > #1 0x40000000001a76a4 in posforkstub ()
> > #2 0xc00000000006c250 in __pthread_body () from
> > /usr/lib/pa20_64/libpthread.1
> > #3 0xc000000000076b0c in __pthread_start () from
> > /usr/lib/pa20_64/libpthread.1
> >
> > thread 1 where
> > #0 0xc000000000076dbc in ___lwp_wait_sys () from
> > /usr/lib/pa20_64/libpthread.1
> > warning: reading `r3' register: No data
> > #1 0xc000000000076870 in _lwp_wait () from
> > /usr/lib/pa20_64/libpthread.1
> > warning: reading `r3' register: No data
> > #2 0xc00000000006d778 in __vp_join () from
> > /usr/lib/pa20_64/libpthread.1
> > warning: reading `r3' register: No data
> > #3 0xc00000000006c368 in pthread_join () from
> > /usr/lib/pa20_64/libpthread.1
> > #4 0x40000000001a761c in CPXPparfork ()
> > #5 0x40000000003612c8 in BAR_neword ()
> > #6 0x4000000000360054 in CPXPbar_doorder ()
> > #7 0x4000000000353c34 in CPXPbar_main ()
> > #8 0x400000000026714c in CPXPcpxbar ()
> > #9 0x4000000000266d68 in baropt ()
> > #10 0x40000000002651e0 in CPXPShybbaropt ()
> > #11 0x400000000018408c in CPXhybbaropt ()
> > #12 0x40000000001ea6d4 in bsolvelp ()
> > #13 0x40000000001e9ff8 in CPXPsolvelp ()
> > #14 0x40000000001aa490 in mipsetup ()
> > #15 0x40000000001a8b94 in mipopt ()
> > #16 0x40000000001a8368 in CPXPSmipopt ()
> > #17 0x40000000001841bc in CPXmipopt ()
> > #18 0x40000000000c7608 in CPXOptimizer::Optimize
> > (this=0x80000001000395a0, optimizati
> > #19 0x4000000000087390 in FAMOptimizerBase::SolveMIP
> > (this=0x80000001000395a0, varGro
> > #20 0x400000000008bffc in FAMOptimizerBase::BranchAndBound
> > (this=0x80000001000395a0,
> > #21 0x400000000008b218 in FAMOptimizerBase::BranchAndBound
> > (this=0x80000001000395a0)
> > #22 0x40000000000a9970 in SolveProblem
> > (optimizerObj=0x80000001000395a0, isLegFamForS
> > AFfamDir=0x800003ffe80f1b38 "/export/local_fs/riad",
> > scenario=0x800003ffe80f1a30
> > #23 0x40000000000a7c14 in main (argc=3, argv=0x800003ffe80f1380) at
> > FAM_OptDriver.C:1
> >
> >
> >
> > Nurman

Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
  #7 (permalink)  
Old 01-16-2008, 05:56 PM
Rick Jones
 
Posts: n/a
Default Re: Pthread Problem

In comp.sys.hp.hpux Nurman Haripin <nurman.haripin@aa.com> wrote:

> Sorry, but how do you use "pthreadsetstack"? Is it a command in gnu
> debugger?


Could that be pthread_attr_getstacksize()

$ man pthread_attr_getstacksize
Reformatting entry. Wait... done

pthread_attr(3T) pthread_attr(3T)
Pthread Library

NAME
pthread_attr_set*(), pthread_attr_get*() - set and get thread
attributes

SYNOPSIS
#include <pthread.h>

rick jones
--
portable adj, code that compiles under more than one compiler
these opinions are mine, all mine; HP might not want them anyway...
feel free to post, OR email to raj in cup.hp.com but NOT BOTH...
Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!
Reply With Quote
Reply


Thread Tools
Display Modes

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

vB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are On
Pingbacks are On
Refbacks are On
Forum Jump


All times are GMT. The time now is 01:29 PM.


Powered by vBulletin® Version 3.6.5
Copyright ©2000 - 2008, Jelsoft Enterprises Ltd.
SEO by vBSEO 3.2.0

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783